This program uses the Needleman–Wunsch and Smith–Waterman algorithms for pairwise protein global and local alignment, respectively. The sequences can be entered in three different ways: string of characters, NCBI accession number or PDB ID. The program can also generate a dot plot for the alignment.
Pairwise Protein Aligner is a free software application from the Teaching & Training Tools subcategory, part of the Education category.
The app is currently available in English and it was last updated on 2012-08-21. The program can be installed on Android.
Pairwise Protein Aligner (version 1.0) is available for download from our website.
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